CDS

Accession Number TCMCG006C72754
gbkey CDS
Protein Id XP_013703022.1
Location join(686977..687073,687248..687429,687658..687744,687933..688058,688145..688207,688289..688438,688615..688682,688766..688877,688952..689056,689148..689269,689405..689551,689622..689790)
Gene LOC106406830
GeneID 106406830
Organism Brassica napus

Protein

Length 475aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013847568.2
Definition 1-deoxy-D-xylulose 5-phosphate reductoisomerase, chloroplastic [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category I
Description 1-deoxy-D-xylulose 5-phosphate reductoisomerase
KEGG_TC -
KEGG_Module M00096        [VIEW IN KEGG]
KEGG_Reaction R05688        [VIEW IN KEGG]
KEGG_rclass RC01452        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00099        [VIEW IN KEGG]
EC 1.1.1.267        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00900        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
map00900        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
GOs GO:0000166        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0006081        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006090        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006644        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006721        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008299        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0008654        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009240        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016114        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016614        [VIEW IN EMBL-EBI]
GO:0016616        [VIEW IN EMBL-EBI]
GO:0019288        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0019682        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0030145        [VIEW IN EMBL-EBI]
GO:0030604        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0046490        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0046914        [VIEW IN EMBL-EBI]
GO:0048037        [VIEW IN EMBL-EBI]
GO:0050661        [VIEW IN EMBL-EBI]
GO:0050662        [VIEW IN EMBL-EBI]
GO:0051483        [VIEW IN EMBL-EBI]
GO:0051484        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0070402        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090407        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATGACGCTTACCTCACTCTCTCCAGCTGATTCCAAATCTCTTTCTTCCTTCTTGGATACCTCCTCCAGGTTCAATCCAACCCCCAAACTCCCAGGTGGGTTTAGTTTGAAGAAGAGGAATCAACGGAGAGGTTTTGGAAAAGGAGTCAAGTGTTCAGTGCAGCAACCTCCTCCTCCAGCATGGCCTGGGAGAGCTGTTCCTGAGTTGCCTCGTCAATCTTGGGATGGGCCTAAACCCATCTCCATCGTTGGGTCTACTGGTTCCATTGGCACTCAGACATTGGACATTGTGGCTGAGAATCCTGACAAATTTAGAGTTGTGGCTTTAGCTGCTGGTTCCAATGTTACTCTCCTTGCTGATCAGGTAAAGAGATTTAAACCAGCATTGGTTGCAGTTAGAAACGAGTCATTACTCAATGAGCTCAAAGAGGCTTTAGCTGATTTGGACTATAAACCTGAGATTATCCCTGGAGAGCAAGGAGTAATTGAGGTTGCTCGCCACCCAGACGCTGTAACTGTTGTTACCGGAATAGTAGGCTGCGCTGGACTAAAGCCAACTGTTGCTGCAATTGAAGCTGGCAAAGACATTGCTCTTGCTAACAAAGAGACATTAATAGCAGGTGGTCCTTTTGTGCTTCCACTCGCCAACAAACATAATGTTAAGATCCTTCCAGCAGATTCAGAACATTCAGCTATATTCCAGTGTATTCAAGGCTTGCCTGAAGGCGCTCTGCGCAAGATAATCTTGACTGCTTCTGGTGGAGCTTTCAGAGATTGGCCTGTTGAAAAACTCAAGGAAGTTAAAGTAGCAGATGCATTTAAGCATCCTAACTGGAACATGGGAAAGAAAATCACAGTGGACTCAGCTACGCTTTTCAACAAGGGTCTTGAGGTCATTGAAGCTCATTATTTGTTTGGGGCTGAGTATGACGATATAGAGATAGTCATTCATCCTCAGAGCATCATTCACTCCATGATTGAAACACAGGATTCATCTGTGCTTGCTCAATTAGGATGGCCTGATATGCGTTTACCGATTCTCTACACCATGTCTTGGCCTGATAGGGTTCCTTGTTCTGAAGTAACTTGGCCAAGACTTGACCTATGCAAACTTGGTTCCTTGACATTCAAGAAACCAGACAATGTAAAATACCCATCAATGGATCTTGCTTATGCTGCTGGACGAGCTGGTGGTACGATGACTGGAGTTCTCAGTGCAGCTAACGAGAAAGCCGTTGAAATGTTCATTGATGAGAAGATAAGCTACTTGGATATCTTCAAGGTAGTGGAGTTAACATGTGATAAACATAGAAACGAGTTGGTATCATCACCATCTCTTGAAGAGATTGTTCACTATGACTTGTGGGCGCGTGAGTACGCTGCTAATGTACAGCTTTCTTCTGGTGCAAGGCCAGTTCCTGCCTGA
Protein:  
MMTLTSLSPADSKSLSSFLDTSSRFNPTPKLPGGFSLKKRNQRRGFGKGVKCSVQQPPPPAWPGRAVPELPRQSWDGPKPISIVGSTGSIGTQTLDIVAENPDKFRVVALAAGSNVTLLADQVKRFKPALVAVRNESLLNELKEALADLDYKPEIIPGEQGVIEVARHPDAVTVVTGIVGCAGLKPTVAAIEAGKDIALANKETLIAGGPFVLPLANKHNVKILPADSEHSAIFQCIQGLPEGALRKIILTASGGAFRDWPVEKLKEVKVADAFKHPNWNMGKKITVDSATLFNKGLEVIEAHYLFGAEYDDIEIVIHPQSIIHSMIETQDSSVLAQLGWPDMRLPILYTMSWPDRVPCSEVTWPRLDLCKLGSLTFKKPDNVKYPSMDLAYAAGRAGGTMTGVLSAANEKAVEMFIDEKISYLDIFKVVELTCDKHRNELVSSPSLEEIVHYDLWAREYAANVQLSSGARPVPA